Bio2RDF

Bio2RDF::Interpro

InterPro is an integrated database of predictive protein 'signatures' used for the classification and automatic annotation of proteins and genomes. InterPro classifies sequences…

Bio2RDF::Sgd

The Saccharomyces Genome Database (SGD) collects and organizes information about the molecular biology and genetics of the yeast Saccharomyces cerevisiae. SGD contains a variety…

Bio2RDF::Homologene

HomoloGene is a system for automated detection of homologs among the annotated genes of several completely sequenced eukaryotic genomes.

Bio2RDF::Mgi

The Mouse Genome Database (MGD) project includes data on gene characterization, nomenclature, mapping, gene homologies among mammals, sequence links, phenotypes, allelic variants…

Bio2RDF::Pubmed

PubMed is a service of the U.S. National Library of Medicine that includes citations from MEDLINE and other life science journals for biomedical articles back to the 1950s.

Bio2RDF::Reactome

The Reactome project is a collaboration to develop a curated resource of core pathways and reactions in human biology.

Bio2RDF::Hgnc

The HGNC gives unique and meaningful names to every human gene. For each known human gene we approve a gene name and symbol (short-form abbreviation). All approved symbols are…

Bio2RDF::Omim

OMIM is a comprehensive, authoritative, and timely compendium of human genes and genetic phenotypes. The full-text, referenced overviews in OMIM contain information on all known…

Bio2RDF::Affymetrix

This dataset contains the probesets used in the Affymetrix microarrays.

Bio2RDF::Ndc

The National Drug Code (NDC) is a unique product identifier used in the United States for drugs intended for human use.

Bio2RDF::Mesh

The MeSH Browser is an online vocabulary look-up aid available for use with MeSH (Medical Subject Headings). It is designed to help quickly locate descriptors of possible interest…

Bio2RDF::Pharmgkb

PharmGKB curates primary genotype and phenotype data, annotates gene variants and gene-drug-disease relationships via literature review, and summarizes important PGx genes and…

Bio2RDF::Sabiork

SABIO-RK is a database for biochemical reactions, their kinetic equations with their parameters, and the experimental conditions under which these parameters were measured.

Bio2RDF::Ncbigene

NCBI Gene provides information for genes from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes,…

Bio2RDF::Irefindex

IrefIndex (Interaction Reference Index) provides an index of protein interactions available in a number of primary interaction databases including BIND, BioGRID, CORUM, DIP, HPRD,…

Bio2RDF::Iproclass

The iProClass database provides value-added information reports for UniProtKB and unique UniParc proteins, with links to over 90 biological databases, including databases for…

Bio2RDF::Goa

The GOA (Gene Ontology Annotation) project provides high-quality Gene Ontology (GO) annotations to proteins in the UniProt Knowledgebase (UniProtKB) and International Protein…

Bio2RDF::Drugbank

The DrugBank database is a bioinformatics and chemoinformatics resource that combines detailed drug (i.e. chemical, pharmacological and pharmaceutical) data with comprehensive…

Bio2RDF::Ctd

CTD includes manually curated data describing cross-species chemical-gene/protein interactions and chemical- and gene-disease relationships to illuminate molecular mechanisms…

Bio2RDF::Biomodels

BioModels Database is a data resource that allows biologists to store, search and retrieve published mathematical models of biological interests.

Bio2RDF::Dbsnp

The dbSNP database is a repository for both single base nucleotide subsitutions and short deletion and insertion polymorphisms.

Bio2RDF::Clinicaltrials

ClinicalTrials.gov is a registry and results database of publicly and privately supported clinical studies of human participants conducted around the world.

Bio2RDF::Lsr

The Resource Registry is a curated collection of datasets and terminologies used in the life sciences

Bio2RDF::Orphanet

Orphanet is a database of information on rare diseases and orphan drugs for all publics. Its aim is to contribute to the improvement of the diagnosis, care and treatment of…

Bio2RDF::Wormbase

WormBase is an online bioinformatics database of the biology and genome of the model organism Caenorhabditis elegans and related nematodes. It is used by the C. elegans research…

Bio2RDF::eco

Bio2RDF::Taxonomy

The NCBI taxonomy database contains the names of all organisms that are represented in the genetic databases with at least one nucleotide or protein sequence.

Bio2RDF::INOH

Is a pathway database of model organisms including human, mouse, rat and others. In INOH, the term pathway refers to higher order functional knowledge such as relationships among…

Bio2RDF::Chembl

ChEMBL is a database of bioactive compounds, their quantitative properties and bioactivities (binding constants, pharmacology and ADMET, etc). The data is abstracted and curated…

Bio2RDF::Wikipathways

WikiPathways is a resource providing an open and public collection of pathway maps created and curated by the community in a Wiki like style. All content is under the Creative…

Bio2RDF::Pathwaycommons

Pathway Commons is a convenient point of access to biological pathway information collected from public pathway databases

Bio2RDF::Sider

SIDER contains information on marketed medicines and their recorded adverse drug reactions. The information is extracted from public documents and package inserts. The available…

Bio2RDF::Linkedspl

LinkedSPL is a Linked Data version of DailyMed

Bio2RDF::Gendr

GenDR is a database of genes associated with dietary restriction (DR). GenDR includes two datasets: 1) genes inferred from experiments in model organisms in which genetic…

Bio2RDF::Genage

GenAge is a database of human and model organism genes related to longevity and aging, maintained by the Human Ageing Genomics Resources (HAGR) group.

Bio2RDF::Bioportal

BioPortal is an open repository of biomedical ontologies that provides access via Web services and Web browsers to ontologies developed in OWL, RDF, OBO format and Protege frames.…

Bio2RDF::zfin

Bio2RDF::zfa

Bio2RDF::zea

Bio2RDF::ypo

Bio2RDF::xeo

Bio2RDF::xco

Bio2RDF::xao

Bio2RDF::wsio_transfer

Bio2RDF::wsio_operation

Bio2RDF::wsio_data

Bio2RDF::wsio_compression

Bio2RDF::wikipedia

Bio2RDF::webelements

Bio2RDF::wbphenotype

Bio2RDF::wbpaper

Bio2RDF::wbls

Bio2RDF::wbis

Bio2RDF::wbbt

Bio2RDF::vz

Bio2RDF::vt

Bio2RDF::vsmo

Bio2RDF::vo

Bio2RDF::vhog

Bio2RDF::vfb

Bio2RDF::vega

Bio2RDF::vario

Bio2RDF::vao

Bio2RDF::value-type

Bio2RDF::v

Bio2RDF::uspto

Bio2RDF::urn

Bio2RDF::uo

Bio2RDF::unipathway

Bio2RDF::unigene

Bio2RDF::umls_cuineedmoresynonoyms

Bio2RDF::umls

Bio2RDF::umbbd

Bio2RDF::ucsc

Bio2RDF::uberon

Bio2RDF::tto

Bio2RDF::ttd

Bio2RDF::tsn

Bio2RDF::tron

Bio2RDF::trembl

Bio2RDF::trak

Bio2RDF::tigr

Bio2RDF::theoutbredstrainofalbinomousefromcharlesriver

Bio2RDF::theonlyoutbredstrainofalbinomousefromharlanlabs

Bio2RDF::tgn

Bio2RDF::tgma

Bio2RDF::termspec

Bio2RDF::tdr

Bio2RDF::tcdb

Bio2RDF::tao

Bio2RDF::tair

Bio2RDF::tads

Bio2RDF::syoid

Bio2RDF::synonym

Bio2RDF::symptom

Bio2RDF::swissprot

Bio2RDF::sweetrealm

Bio2RDF::stitch

Bio2RDF::ssb

Bio2RDF::spire

Bio2RDF::spd

Bio2RDF::soywgr

Bio2RDF::soyto

Bio2RDF::soygro

Bio2RDF::soy

Bio2RDF::source

Bio2RDF::solcap

Bio2RDF::so

Bio2RDF::snomedct

Bio2RDF::snap

Bio2RDF::sgf

Bio2RDF::sep

Bio2RDF::sctid

Bio2RDF::scop

Bio2RDF::sce

Bio2RDF::scale

Bio2RDF::sbol

Bio2RDF::sbo

Bio2RDF::sao

Bio2RDF::sael

Bio2RDF::rxno

Bio2RDF::rs

Bio2RDF::ro

Bio2RDF::rgd

Bio2RDF::rgap

Bio2RDF::rexo

Bio2RDF::rex

Bio2RDF::reto

Bio2RDF::resid

Bio2RDF::refseq

Bio2RDF::reaxys

Bio2RDF::rdo

Bio2RDF::rapdb

Bio2RDF::radlex

Bio2RDF::pw

Bio2RDF::pvp

Bio2RDF::pto

Bio2RDF::pt

Bio2RDF::pseudomonas

Bio2RDF::pseudocap

Bio2RDF::pride

Bio2RDF::priam

Bio2RDF::pr

Bio2RDF::potato_cooperators

Bio2RDF::pombase

Bio2RDF::po

Bio2RDF::pmrna

Bio2RDF::pmdermo

Bio2RDF::plo

Bio2RDF::plantsystematics_image_archive

Bio2RDF::pirsf

Bio2RDF::phi

Bio2RDF::pgo

Bio2RDF::peroxibase

Bio2RDF::pdbechem

Bio2RDF::pato

Bio2RDF::pandit

Bio2RDF::osics-10

Bio2RDF::origin

Bio2RDF::ordr

Bio2RDF::opb

Bio2RDF::omit

Bio2RDF::ogms

Bio2RDF::ogmd

Bio2RDF::obo_sf_obo

Bio2RDF::obo_sf_go

Bio2RDF::obo_sf_eo

Bio2RDF::obo_sf2_eo

Bio2RDF::obi

Bio2RDF::nonpubmed

Bio2RDF::nmosp

Bio2RDF::nmodb

Bio2RDF::nlx

Bio2RDF::nistchemistrywebbook

Bio2RDF::nif_organism

Bio2RDF::ne1014

Bio2RDF::ndfrt

Bio2RDF::ncit

Bio2RDF::nbo

Bio2RDF::narcis

Bio2RDF::namerxn

Bio2RDF::mvc

Bio2RDF::mutdb

Bio2RDF::msd

Bio2RDF::mpath

Bio2RDF::mp

Bio2RDF::mosbp

Bio2RDF::mop

Bio2RDF::molbase

Bio2RDF::modbase

Bio2RDF::mmo

Bio2RDF::miro

Bio2RDF::miriam

Bio2RDF::mirbase

Bio2RDF::mips

Bio2RDF::mi

Bio2RDF::mfo

Bio2RDF::metacyc

Bio2RDF::mesh_dui

Bio2RDF::merops