DataHub v1 is the original DataHub catalog of 11,000+ open datasets, now migrated to PortalJS Arc.
Dataset

TubercuList - Mycobacterium Tuberculosis Database

The most complete H37Rv genome, manually annotated.

About

The most complete H37Rv genome, manually annotated.

Different from the french http://genolist.pasteur.fr/TubercuList/ which is not up-to-date.

However, both genomes are much better than the one in UniProt, which is also mixed with CD1551, according to their help desk.

Swiss TubercuList in numbers:

  • 4,411,532 bp of DNA sequence representing the whole Mycobacterium tuberculosis chromosome (strain H37Rv, EMBL/GenBank/DDBJ entry AL123456)
  • 4,011 protein genes
  • 7 pseudogenes
  • 45 tRNA genes
  • 3 rRNA genes
  • 2 stable RNA genes
  • 9 sRNA genes
  • Gene density: 1,099 bases per gene
  • Average gene length: 1,004 bases per gene
  • Protein coding (CDS) bases: 4,028,175
  • Protein coding percentage: 91.3%
  • GC percentage: 65.61 %
Sources & license